Wild strawberry transcriptomes
Fragaria vesca tissue expression atlas aligned to the Hawaii-4 T2T v6 reference.
- Genes
- 36,173
- Libraries
- 233
- Tissues
- 9
- Unit
- TPM
Explore co-expression networks
Each entry is an independently processed study.
Sample and condition details
Select a dataset to inspect its matrix columns.
Download sample table (TSV)JSONAll transcriptome sample tables
One row per expression-matrix column. Condition summaries are not independent biological replicates; absent run or replicate information is not inferred.
| Index | Matrix column | Source code | Tissue / condition | Stage code | Column role |
|---|
Build a tissue heatmap
The preset contains one strongly enriched gene for each tissue group.
Cultivated strawberry eFP
Inspect one Camarosa v1.0.a2 gene across vegetative, floral and fruit-development tissues.
FxaC_2g30690
Fragaria × ananassa · ‘Camarosa’ v1.0.a2
Independent colour scales
Colour intensity is calculated as log2(TPM + 1) within each project. Compare tissues inside one panel, not absolute colour between projects.
Tissue expression map
Hover or focus a coloured tissue to inspect its TPM value.
Organs · PRJNA508389
0—
Fruit · PRJEB12420
0—
About this matrix
Dataset and methods
A harmonized expression resource for exploring tissue-enriched genes.
- Study
- Strawberry atlas
- Accession
- Hawaii-4 (H4)
- Experimental design
- 233 RNA-seq libraries grouped into nine tissue categories.
- Processing
- Expression values were harmonized against the Hawaii-4 T2T v6 reference.
- Reference
- Hawaii-4 T2T v6.0
- How to use
- Compare a gene across tissues within this dataset.
- Important